Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 VDAC1P7-201ENST00000462417 847 ntBASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 AC123567.1-201ENST00000548294 1261 ntBASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 AC138761.1-201ENST00000584393 385 ntBASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB11FIP4Q86YS3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RAB11FIP4Q86YS3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.14■□□□□ 0.5
RAB11FIP4Q86YS3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.14■□□□□ 0.5
RAB11FIP4Q86YS3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB11FIP4Q86YS3 LINC00528-201ENST00000600723 2160 ntBASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 TERF1P3-201ENST00000505638 1227 ntBASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AC093004.1-201ENST00000508850 424 ntBASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AC055876.2-201ENST00000531834 546 ntBASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AC036164.1-201ENST00000570544 333 ntBASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AC000095.1-201ENST00000603208 874 ntBASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AL662799.1-202ENST00000614205 422 ntBASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RAB11FIP4Q86YS3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 AL049840.4-201ENST00000602422 811 ntBASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAB11FIP4Q86YS3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms