Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 WASH4P-201ENST00000564273 1246 ntBASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AC140912.1-201ENST00000577171 1054 ntBASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AL049840.4-201ENST00000602422 811 ntBASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AL035252.4-201ENST00000624174 288 ntBASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 AL358472.5-202ENST00000641448 1267 ntBASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD3Q7Z3D4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 AP002414.2-201ENST00000591780 3365 ntBASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 RPL5P21-201ENST00000404620 815 ntBASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 MYCLP2-201ENST00000449268 967 ntBASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 AC104596.2-201ENST00000512793 793 ntBASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 AC012645.4-201ENST00000610691 1061 ntBASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 SNX18-202ENST00000343017 3140 ntBASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD3Q7Z3D4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 VDAC1P7-201ENST00000462417 847 ntBASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 TP53TG3HP-202ENST00000569755 579 ntBASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 Z99916.3-201ENST00000623422 1080 ntBASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 AC025048.6-201ENST00000634326 1161 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms