Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 AC011495.1-201ENST00000498085 584 ntBASIC14.84□□□□□ -0.03
RNF44Q7L0R7 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.84□□□□□ -0.03
RNF44Q7L0R7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF44Q7L0R7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF44Q7L0R7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RNF44Q7L0R7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF44Q7L0R7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
RNF44Q7L0R7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF44Q7L0R7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF44Q7L0R7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF44Q7L0R7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF44Q7L0R7 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.83□□□□□ -0.04
RNF44Q7L0R7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 AL162726.2-201ENST00000438986 1017 ntBASIC14.83□□□□□ -0.04
RNF44Q7L0R7 GAPDHP21-201ENST00000450301 1010 ntBASIC14.83□□□□□ -0.04
RNF44Q7L0R7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 CR383656.12-201ENST00000549567 513 ntBASIC14.83□□□□□ -0.04
RNF44Q7L0R7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 AL033527.5-201ENST00000641382 801 ntBASIC14.83□□□□□ -0.04
RNF44Q7L0R7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF44Q7L0R7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 OR2I1P-209ENST00000641730 5365 ntBASIC14.82□□□□□ -0.04
RNF44Q7L0R7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 INE1-201ENST00000456273 945 ntBASIC14.82□□□□□ -0.04
RNF44Q7L0R7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF44Q7L0R7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms