Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 AL645728.2-202ENST00000641679 227 ntBASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 AC148477.4-201ENST00000613430 1793 ntBASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC149Q6ZUS6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AC084364.1-201ENST00000551967 1556 ntBASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AC007787.1-201ENST00000588095 1583 ntBASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AC112504.1-201ENST00000623415 1841 ntBASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AC063926.3-201ENST00000624734 5658 ntBASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AC079328.1-201ENST00000560358 952 ntBASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 ECM1P1-201ENST00000604092 1279 ntBASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AL096828.3-201ENST00000615354 462 ntBASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC149Q6ZUS6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC149Q6ZUS6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms