Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 RN7SKP214-201ENST00000364208 315 ntBASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 AC103988.2-201ENST00000561804 725 ntBASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 DUX4L46-201ENST00000566845 751 ntBASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 AC010141.1-201ENST00000411585 623 ntBASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 RPL18P13-201ENST00000478088 569 ntBASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 AC090857.1-201ENST00000527400 390 ntBASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 AL160314.3-201ENST00000556041 767 ntBASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 SNORD3B-2-202ENST00000571722 791 ntBASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.38■□□□□ 0.21
CNKSR3Q6P9H4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 ISCA2P1-201ENST00000425548 448 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 PDIA3P2-201ENST00000428073 158 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 CEP164P1-201ENST00000455142 418 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 IQSEC3P1-201ENST00000538799 536 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 MIR3147-201ENST00000577811 66 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 AL132994.2-201ENST00000603120 687 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 AC012044.1-201ENST00000603431 297 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 AC006453.1-201ENST00000636037 1257 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 NAP1L6-202ENST00000641404 1222 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms