Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRK2Q5S007 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.15□□□□□ -0.3
LRRK2Q5S007 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRK2Q5S007 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.15□□□□□ -0.3
LRRK2Q5S007 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRK2Q5S007 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRK2Q5S007 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LRRK2Q5S007 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LRRK2Q5S007 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LRRK2Q5S007 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LRRK2Q5S007 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LRRK2Q5S007 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LRRK2Q5S007 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 AL390961.4-201ENST00000623958 2535 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 RN7SL846P-201ENST00000467429 292 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 AC093909.3-201ENST00000504783 336 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 IGHEP1-201ENST00000521393 651 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 AC018846.1-201ENST00000568231 183 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 AC055811.3-201ENST00000584952 686 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 AC012073.1-201ENST00000606114 1108 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 AC084781.1-201ENST00000613737 656 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 AP001184.1-201ENST00000637936 376 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 Z98259.2-201ENST00000641583 609 ntBASIC13.14□□□□□ -0.31
LRRK2Q5S007 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRK2Q5S007 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRK2Q5S007 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AL645933.1-201ENST00000440087 609 ntBASIC13.13□□□□□ -0.31
LRRK2Q5S007 AP000358.1-201ENST00000456260 156 ntBASIC13.13□□□□□ -0.31
LRRK2Q5S007 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRK2Q5S007 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LRRK2Q5S007 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms