Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC068587.6-202ENST00000641839 5619 ntBASIC17.7■□□□□ 0.42
USH1GQ495M9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USH1GQ495M9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
USH1GQ495M9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USH1GQ495M9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USH1GQ495M9 AC007787.1-201ENST00000588095 1583 ntBASIC17.7■□□□□ 0.42
USH1GQ495M9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USH1GQ495M9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USH1GQ495M9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 AL158070.2-201ENST00000623713 1621 ntBASIC17.69■□□□□ 0.42
USH1GQ495M9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
USH1GQ495M9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.69■□□□□ 0.42
USH1GQ495M9 AC007950.2-201ENST00000615045 2347 ntBASIC17.69■□□□□ 0.42
USH1GQ495M9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.69■□□□□ 0.42
USH1GQ495M9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
USH1GQ495M9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
USH1GQ495M9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 HLA-V-201ENST00000429037 534 ntBASIC17.69■□□□□ 0.42
USH1GQ495M9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.69■□□□□ 0.42
USH1GQ495M9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.69■□□□□ 0.42
USH1GQ495M9 KRT90P-201ENST00000549264 1064 ntBASIC17.69■□□□□ 0.42
USH1GQ495M9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.69■□□□□ 0.42
USH1GQ495M9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.69■□□□□ 0.42
USH1GQ495M9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.69■□□□□ 0.42
USH1GQ495M9 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.69■□□□□ 0.42
USH1GQ495M9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USH1GQ495M9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.68■□□□□ 0.42
USH1GQ495M9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
USH1GQ495M9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.68■□□□□ 0.42
USH1GQ495M9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
USH1GQ495M9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USH1GQ495M9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.68■□□□□ 0.42
USH1GQ495M9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.68■□□□□ 0.42
USH1GQ495M9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
USH1GQ495M9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.68■□□□□ 0.42
USH1GQ495M9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.68■□□□□ 0.42
USH1GQ495M9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.68■□□□□ 0.42
USH1GQ495M9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.68■□□□□ 0.42
USH1GQ495M9 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.68■□□□□ 0.42
USH1GQ495M9 AL033527.4-201ENST00000641026 673 ntBASIC17.68■□□□□ 0.42
USH1GQ495M9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.68■□□□□ 0.42
USH1GQ495M9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.68■□□□□ 0.42
USH1GQ495M9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USH1GQ495M9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.67■□□□□ 0.42
USH1GQ495M9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.67■□□□□ 0.42
USH1GQ495M9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
USH1GQ495M9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
USH1GQ495M9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
USH1GQ495M9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.67■□□□□ 0.42
USH1GQ495M9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USH1GQ495M9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USH1GQ495M9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.67■□□□□ 0.42
USH1GQ495M9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.67■□□□□ 0.42
USH1GQ495M9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms