Protein–RNA interactions for Protein: Q3SY05

LINC00303, Putative uncharacterized protein encoded by LINC00303, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00303Q3SY05 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.54□□□□□ -0.08
LINC00303Q3SY05 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00303Q3SY05 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 NUS1P3-201ENST00000423502 862 ntBASIC14.53□□□□□ -0.08
LINC00303Q3SY05 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 AC004898.1-201ENST00000451057 766 ntBASIC14.53□□□□□ -0.08
LINC00303Q3SY05 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 HIST2H2BC-201ENST00000498492 580 ntBASIC14.53□□□□□ -0.08
LINC00303Q3SY05 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 AP006547.1-201ENST00000563435 692 ntBASIC14.53□□□□□ -0.08
LINC00303Q3SY05 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.53□□□□□ -0.08
LINC00303Q3SY05 AC025279.2-201ENST00000569730 653 ntBASIC14.53□□□□□ -0.08
LINC00303Q3SY05 MIR4741-201ENST00000579822 90 ntBASIC14.53□□□□□ -0.08
LINC00303Q3SY05 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00303Q3SY05 REXO1L8P-201ENST00000604378 1897 ntBASIC14.52□□□□□ -0.08
LINC00303Q3SY05 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00303Q3SY05 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms