Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO4Q2I0M5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RSPO4Q2I0M5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RSPO4Q2I0M5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RSPO4Q2I0M5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
RSPO4Q2I0M5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.83□□□□□ -0.03
RSPO4Q2I0M5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.83□□□□□ -0.03
RSPO4Q2I0M5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 AL136309.1-201ENST00000403917 691 ntBASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 RCC2P8-201ENST00000502779 1035 ntBASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 ALG1L6P-201ENST00000515248 758 ntBASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 AC005324.6-201ENST00000587972 613 ntBASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO4Q2I0M5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 POM121L8P-201ENST00000417732 1281 ntBASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 RPL8P2-201ENST00000430538 502 ntBASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 POM121L9P-203ENST00000441984 1285 ntBASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 RN7SL67P-201ENST00000492147 296 ntBASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RSPO4Q2I0M5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
RSPO4Q2I0M5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms