Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 AC010491.1-201ENST00000563101 2797 ntBASIC13.18□□□□□ -0.3
EFNB3Q15768 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNB3Q15768 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNB3Q15768 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNB3Q15768 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.17□□□□□ -0.3
EFNB3Q15768 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 AL645937.2-201ENST00000396808 931 ntBASIC13.17□□□□□ -0.3
EFNB3Q15768 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 AC016694.1-201ENST00000434179 700 ntBASIC13.17□□□□□ -0.3
EFNB3Q15768 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 RPS2P32-201ENST00000439199 892 ntBASIC13.17□□□□□ -0.3
EFNB3Q15768 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 AC007551.1-201ENST00000457394 519 ntBASIC13.17□□□□□ -0.3
EFNB3Q15768 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 AP000812.2-201ENST00000538934 718 ntBASIC13.17□□□□□ -0.3
EFNB3Q15768 SNX29P1-201ENST00000548357 1007 ntBASIC13.17□□□□□ -0.3
EFNB3Q15768 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.17□□□□□ -0.3
EFNB3Q15768 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
EFNB3Q15768 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.17□□□□□ -0.3
EFNB3Q15768 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNB3Q15768 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNB3Q15768 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNB3Q15768 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
EFNB3Q15768 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNB3Q15768 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
EFNB3Q15768 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
EFNB3Q15768 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNB3Q15768 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
EFNB3Q15768 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNB3Q15768 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB3Q15768 C2orf27AP3-201ENST00000434123 579 ntBASIC13.16□□□□□ -0.3
EFNB3Q15768 RPL7P3-201ENST00000441388 714 ntBASIC13.16□□□□□ -0.3
EFNB3Q15768 AC114812.1-204ENST00000449669 728 ntBASIC13.16□□□□□ -0.3
EFNB3Q15768 CTBP2P5-201ENST00000454986 1264 ntBASIC13.16□□□□□ -0.3
EFNB3Q15768 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
EFNB3Q15768 AC004066.1-201ENST00000502488 802 ntBASIC13.16□□□□□ -0.3
EFNB3Q15768 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
EFNB3Q15768 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.16□□□□□ -0.3
EFNB3Q15768 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms