Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 REXO1L1P-202ENST00000608646 1974 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 CICP20-201ENST00000443330 2801 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 FAM220BP-201ENST00000377689 816 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 AC004987.2-201ENST00000395959 1148 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 ADH5P3-201ENST00000433842 1137 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 AL592309.1-201ENST00000443127 649 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 AL139010.1-201ENST00000454878 894 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 KRT8P23-201ENST00000560090 1207 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 MTDHP5-201ENST00000598980 586 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 AC026979.3-201ENST00000607315 403 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 C20orf181-201ENST00000623918 480 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 AC232323.1-201ENST00000540724 2099 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 REXO1L5P-201ENST00000622260 2098 ntBASIC11.93□□□□□ -0.5
HIST1H1AQ02539 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
HIST1H1AQ02539 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 AC009090.5-201ENST00000624886 2285 ntBASIC11.92□□□□□ -0.5
HIST1H1AQ02539 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HIST1H1AQ02539 RPS8P6-201ENST00000426177 609 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms