Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 MINOS1P3-201ENST00000457048 203 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AC096582.2-201ENST00000510860 516 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 IFNL4P1-201ENST00000607083 540 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AC073592.4-201ENST00000623827 446 ntBASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ERVFC1-1P60608 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 AC245100.5-201ENST00000452108 331 ntBASIC12.11□□□□□ -0.47
ERVFC1-1P60608 AC091607.1-201ENST00000490318 1060 ntBASIC12.11□□□□□ -0.47
ERVFC1-1P60608 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 AC138894.3-201ENST00000603787 634 ntBASIC12.11□□□□□ -0.47
ERVFC1-1P60608 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 AF228730.7-201ENST00000641842 219 ntBASIC12.11□□□□□ -0.47
ERVFC1-1P60608 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 AL359881.3-201ENST00000602640 1721 ntBASIC12.11□□□□□ -0.47
ERVFC1-1P60608 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 WASH6P-202ENST00000359512 1437 ntBASIC12.11□□□□□ -0.47
ERVFC1-1P60608 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ERVFC1-1P60608 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms