Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 ACTBP8-201ENST00000403258 1108 ntBASIC15.21■□□□□ 0.03
CLDN2P57739 MIR1202-201ENST00000408529 83 ntBASIC15.21■□□□□ 0.03
CLDN2P57739 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN2P57739 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN2P57739 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN2P57739 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN2P57739 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN2P57739 AC114812.1-204ENST00000449669 728 ntBASIC15.21■□□□□ 0.03
CLDN2P57739 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN2P57739 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN2P57739 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN2P57739 AC004066.1-201ENST00000502488 802 ntBASIC15.21■□□□□ 0.03
CLDN2P57739 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 FAM8A2P-201ENST00000528813 1142 ntBASIC15.21■□□□□ 0.03
CLDN2P57739 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN2P57739 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN2P57739 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.21■□□□□ 0.03
CLDN2P57739 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN2P57739 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.21■□□□□ 0.03
CLDN2P57739 RN7SL560P-201ENST00000577943 264 ntBASIC15.21■□□□□ 0.03
CLDN2P57739 ECM1P1-201ENST00000604092 1279 ntBASIC15.21■□□□□ 0.03
CLDN2P57739 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN2P57739 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.21■□□□□ 0.02
CLDN2P57739 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.21■□□□□ 0.02
CLDN2P57739 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN2P57739 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.21■□□□□ 0.02
CLDN2P57739 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
CLDN2P57739 AC046158.3-201ENST00000624947 2558 ntBASIC15.21■□□□□ 0.02
CLDN2P57739 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLDN2P57739 AL158070.2-201ENST00000623713 1621 ntBASIC15.21■□□□□ 0.02
CLDN2P57739 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.21■□□□□ 0.02
CLDN2P57739 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLDN2P57739 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN2P57739 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN2P57739 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN2P57739 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN2P57739 RNA5SP486-201ENST00000515961 83 ntBASIC15.2■□□□□ 0.02
CLDN2P57739 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLDN2P57739 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN2P57739 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.2■□□□□ 0.02
CLDN2P57739 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.2■□□□□ 0.02
CLDN2P57739 AC023310.1-201ENST00000554836 735 ntBASIC15.2■□□□□ 0.02
CLDN2P57739 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.2■□□□□ 0.02
CLDN2P57739 AC132938.4-201ENST00000623835 848 ntBASIC15.2■□□□□ 0.02
CLDN2P57739 AC092850.2-201ENST00000623821 2697 ntBASIC15.2■□□□□ 0.02
CLDN2P57739 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 LRRC59-203ENST00000576448 1531 ntBASIC15.2■□□□□ 0.02
CLDN2P57739 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
CLDN2P57739 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLDN2P57739 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.2■□□□□ 0.02
CLDN2P57739 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLDN2P57739 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN2P57739 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLDN2P57739 AHCYP2-201ENST00000430630 1300 ntBASIC15.19■□□□□ 0.02
CLDN2P57739 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN2P57739 AP005117.1-202ENST00000581724 1908 ntBASIC15.19■□□□□ 0.02
CLDN2P57739 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDN2P57739 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN2P57739 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CLDN2P57739 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN2P57739 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN2P57739 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN2P57739 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDN2P57739 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDN2P57739 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms