Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN6P56747 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CLDN6P56747 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.8□□□□□ -0.04
CLDN6P56747 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN6P56747 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.8□□□□□ -0.04
CLDN6P56747 AC016700.1-201ENST00000429424 312 ntBASIC14.8□□□□□ -0.04
CLDN6P56747 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 FTLP10-202ENST00000505798 471 ntBASIC14.8□□□□□ -0.04
CLDN6P56747 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN6P56747 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN6P56747 AC005730.2-201ENST00000564549 1184 ntBASIC14.8□□□□□ -0.04
CLDN6P56747 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN6P56747 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN6P56747 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
CLDN6P56747 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.8□□□□□ -0.04
CLDN6P56747 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CLDN6P56747 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN6P56747 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLDN6P56747 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN6P56747 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN6P56747 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN6P56747 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLDN6P56747 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN6P56747 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN6P56747 AL662844.4-201ENST00000606367 2838 ntBASIC14.79□□□□□ -0.04
CLDN6P56747 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN6P56747 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN6P56747 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN6P56747 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN6P56747 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN6P56747 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.79□□□□□ -0.04
CLDN6P56747 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.79□□□□□ -0.04
CLDN6P56747 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN6P56747 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN6P56747 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN6P56747 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN6P56747 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN6P56747 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLDN6P56747 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN6P56747 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLDN6P56747 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN6P56747 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLDN6P56747 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN6P56747 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN6P56747 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLDN6P56747 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN6P56747 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN6P56747 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms