Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH8P55286 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH8P55286 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 AC126365.1-201ENST00000578585 1514 ntBASIC16.46■□□□□ 0.23
CDH8P55286 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.46■□□□□ 0.23
CDH8P55286 MSTO2P-201ENST00000314835 1709 ntBASIC16.46■□□□□ 0.23
CDH8P55286 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH8P55286 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDH8P55286 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 AL162726.2-201ENST00000438986 1017 ntBASIC16.46■□□□□ 0.23
CDH8P55286 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH8P55286 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.46■□□□□ 0.23
CDH8P55286 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH8P55286 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH8P55286 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH8P55286 AC010319.3-201ENST00000597028 470 ntBASIC16.46■□□□□ 0.23
CDH8P55286 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH8P55286 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 AC007787.1-201ENST00000588095 1583 ntBASIC16.46■□□□□ 0.23
CDH8P55286 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH8P55286 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.46■□□□□ 0.23
CDH8P55286 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CDH8P55286 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH8P55286 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH8P55286 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH8P55286 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH8P55286 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH8P55286 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH8P55286 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH8P55286 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.46■□□□□ 0.22
CDH8P55286 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH8P55286 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH8P55286 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDH8P55286 AL512384.1-201ENST00000406683 331 ntBASIC16.45■□□□□ 0.22
CDH8P55286 TMEM14DP-201ENST00000422205 345 ntBASIC16.45■□□□□ 0.22
CDH8P55286 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH8P55286 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CDH8P55286 ENPP7P5-201ENST00000541031 1031 ntBASIC16.45■□□□□ 0.22
CDH8P55286 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH8P55286 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH8P55286 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH8P55286 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH8P55286 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH8P55286 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CDH8P55286 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CDH8P55286 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH8P55286 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH8P55286 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH8P55286 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH8P55286 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH8P55286 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDH8P55286 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 AC006486.2-201ENST00000624246 2199 ntBASIC16.44■□□□□ 0.22
CDH8P55286 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms