Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CDH4P55283 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 AC022532.1-201ENST00000624563 1728 ntBASIC15.74■□□□□ 0.11
CDH4P55283 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH4P55283 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH4P55283 KLF2P2-201ENST00000416807 1039 ntBASIC15.74■□□□□ 0.11
CDH4P55283 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH4P55283 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH4P55283 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH4P55283 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH4P55283 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH4P55283 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH4P55283 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.74■□□□□ 0.11
CDH4P55283 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH4P55283 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CDH4P55283 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH4P55283 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH4P55283 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDH4P55283 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDH4P55283 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH4P55283 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CDH4P55283 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH4P55283 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH4P55283 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CDH4P55283 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH4P55283 AC018665.1-201ENST00000622927 1362 ntBASIC15.74■□□□□ 0.11
CDH4P55283 PPT1-215ENST00000641471 2368 ntBASIC15.73■□□□□ 0.11
CDH4P55283 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
CDH4P55283 KRT8P35-201ENST00000483942 1338 ntBASIC15.73■□□□□ 0.11
CDH4P55283 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH4P55283 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH4P55283 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH4P55283 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH4P55283 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH4P55283 ACTBP8-201ENST00000403258 1108 ntBASIC15.73■□□□□ 0.11
CDH4P55283 AL139094.1-201ENST00000405549 1188 ntBASIC15.73■□□□□ 0.11
CDH4P55283 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH4P55283 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 KRT43P-201ENST00000434019 910 ntBASIC15.73■□□□□ 0.11
CDH4P55283 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH4P55283 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH4P55283 KRT17P8-201ENST00000540749 863 ntBASIC15.73■□□□□ 0.11
CDH4P55283 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CDH4P55283 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.73■□□□□ 0.11
CDH4P55283 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms