Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.77□□□□□ -0.04
NR1H2P55055 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NR1H2P55055 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H2P55055 ZBED1P1-201ENST00000502364 1930 ntBASIC14.77□□□□□ -0.04
NR1H2P55055 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H2P55055 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H2P55055 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
NR1H2P55055 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H2P55055 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.77□□□□□ -0.05
NR1H2P55055 AC004835.2-201ENST00000603762 682 ntBASIC14.77□□□□□ -0.05
NR1H2P55055 AC106028.4-201ENST00000614509 607 ntBASIC14.77□□□□□ -0.05
NR1H2P55055 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.77□□□□□ -0.05
NR1H2P55055 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.77□□□□□ -0.05
NR1H2P55055 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NR1H2P55055 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H2P55055 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NR1H2P55055 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H2P55055 AC005622.1-201ENST00000636801 1703 ntBASIC14.77□□□□□ -0.05
NR1H2P55055 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H2P55055 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.77□□□□□ -0.05
NR1H2P55055 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H2P55055 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
NR1H2P55055 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NR1H2P55055 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.76□□□□□ -0.05
NR1H2P55055 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 CYMP-203ENST00000474680 1263 ntBASIC14.76□□□□□ -0.05
NR1H2P55055 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.76□□□□□ -0.05
NR1H2P55055 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 MPDU1-223ENST00000582151 728 ntBASIC14.76□□□□□ -0.05
NR1H2P55055 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 ACTL9-202ENST00000612068 1252 ntBASIC14.76□□□□□ -0.05
NR1H2P55055 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H2P55055 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H2P55055 AC092135.3-201ENST00000624151 1846 ntBASIC14.76□□□□□ -0.05
NR1H2P55055 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
NR1H2P55055 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
NR1H2P55055 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NR1H2P55055 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms