Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.01■□□□□ 0.31
PMS1P54277 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.01■□□□□ 0.31
PMS1P54277 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.01■□□□□ 0.31
PMS1P54277 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.01■□□□□ 0.31
PMS1P54277 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 AL158212.4-201ENST00000624062 1286 ntBASIC17.01■□□□□ 0.31
PMS1P54277 AC004840.1-201ENST00000636359 365 ntBASIC17.01■□□□□ 0.31
PMS1P54277 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.01■□□□□ 0.31
PMS1P54277 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PMS1P54277 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PMS1P54277 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PMS1P54277 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17■□□□□ 0.31
PMS1P54277 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17■□□□□ 0.31
PMS1P54277 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17■□□□□ 0.31
PMS1P54277 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PMS1P54277 AC007191.1-201ENST00000623179 2995 ntBASIC17■□□□□ 0.31
PMS1P54277 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17■□□□□ 0.31
PMS1P54277 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17■□□□□ 0.31
PMS1P54277 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17■□□□□ 0.31
PMS1P54277 AC241585.1-201ENST00000433527 519 ntBASIC17■□□□□ 0.31
PMS1P54277 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17■□□□□ 0.31
PMS1P54277 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 5S_rRNA.22-201ENST00000614916 106 ntBASIC17■□□□□ 0.31
PMS1P54277 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17■□□□□ 0.31
PMS1P54277 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17■□□□□ 0.31
PMS1P54277 AC005912.2-201ENST00000619492 2400 ntBASIC17■□□□□ 0.31
PMS1P54277 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 AC007292.2-201ENST00000593524 1812 ntBASIC17■□□□□ 0.31
PMS1P54277 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17■□□□□ 0.31
PMS1P54277 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 AC026748.1-201ENST00000624349 3251 ntBASIC17■□□□□ 0.31
PMS1P54277 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17■□□□□ 0.31
PMS1P54277 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PMS1P54277 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PMS1P54277 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PMS1P54277 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.99■□□□□ 0.31
PMS1P54277 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
PMS1P54277 CLK3P2-201ENST00000427566 1453 ntBASIC16.99■□□□□ 0.31
PMS1P54277 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.99■□□□□ 0.31
PMS1P54277 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PMS1P54277 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PMS1P54277 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PMS1P54277 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
PMS1P54277 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.99■□□□□ 0.31
PMS1P54277 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.99■□□□□ 0.31
PMS1P54277 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.99■□□□□ 0.31
PMS1P54277 AC004890.2-204ENST00000481968 304 ntBASIC16.99■□□□□ 0.31
PMS1P54277 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.99■□□□□ 0.31
PMS1P54277 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 AL390754.1-201ENST00000619088 582 ntBASIC16.99■□□□□ 0.31
PMS1P54277 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.99■□□□□ 0.31
PMS1P54277 AL645728.2-202ENST00000641679 227 ntBASIC16.99■□□□□ 0.31
PMS1P54277 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 AC140479.7-201ENST00000636301 2332 ntBASIC16.99■□□□□ 0.31
PMS1P54277 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PMS1P54277 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
PMS1P54277 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PMS1P54277 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 AC139749.1-202ENST00000617529 3139 ntBASIC16.99■□□□□ 0.31
PMS1P54277 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PMS1P54277 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.98■□□□□ 0.31
PMS1P54277 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PMS1P54277 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PMS1P54277 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms