Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
PDX1P52945 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
PDX1P52945 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PDX1P52945 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PDX1P52945 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.03■□□□□ -0
PDX1P52945 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.02■□□□□ -0
PDX1P52945 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.02■□□□□ -0
PDX1P52945 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.02■□□□□ -0
PDX1P52945 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PDX1P52945 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.02■□□□□ -0
PDX1P52945 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PDX1P52945 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PDX1P52945 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PDX1P52945 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PDX1P52945 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.02■□□□□ -0
PDX1P52945 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PDX1P52945 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
PDX1P52945 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.02■□□□□ -0
PDX1P52945 AC022137.2-201ENST00000503482 481 ntBASIC15.02■□□□□ -0
PDX1P52945 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.02■□□□□ -0
PDX1P52945 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.02■□□□□ -0
PDX1P52945 AC026410.3-201ENST00000514280 936 ntBASIC15.02■□□□□ -0
PDX1P52945 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.02■□□□□ -0
PDX1P52945 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.02■□□□□ -0
PDX1P52945 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.02■□□□□ -0
PDX1P52945 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.02■□□□□ -0
PDX1P52945 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.02■□□□□ -0
PDX1P52945 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.02■□□□□ -0
PDX1P52945 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
PDX1P52945 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
PDX1P52945 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.02□□□□□ -0.01
PDX1P52945 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 AC018892.3-201ENST00000623986 2499 ntBASIC15.02□□□□□ -0.01
PDX1P52945 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDX1P52945 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PDX1P52945 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 AC126755.1-201ENST00000525846 6405 ntBASIC15.01□□□□□ -0.01
PDX1P52945 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.01□□□□□ -0.01
PDX1P52945 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.01□□□□□ -0.01
PDX1P52945 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.01□□□□□ -0.01
PDX1P52945 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 AC016694.1-201ENST00000434179 700 ntBASIC15.01□□□□□ -0.01
PDX1P52945 YBX1P6-201ENST00000442962 1002 ntBASIC15.01□□□□□ -0.01
PDX1P52945 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.01□□□□□ -0.01
PDX1P52945 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.01□□□□□ -0.01
PDX1P52945 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.01□□□□□ -0.01
PDX1P52945 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.01□□□□□ -0.01
PDX1P52945 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.01□□□□□ -0.01
PDX1P52945 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.01□□□□□ -0.01
PDX1P52945 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.01□□□□□ -0.01
PDX1P52945 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.01□□□□□ -0.01
PDX1P52945 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDX1P52945 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PDX1P52945 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PDX1P52945 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms