Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 AL008718.2-201ENST00000609206 1313 ntBASIC16.84■□□□□ 0.29
BRCA2P51587 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.84■□□□□ 0.29
BRCA2P51587 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.84■□□□□ 0.29
BRCA2P51587 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.84■□□□□ 0.29
BRCA2P51587 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.84■□□□□ 0.29
BRCA2P51587 AC008805.1-201ENST00000590892 364 ntBASIC16.84■□□□□ 0.29
BRCA2P51587 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
BRCA2P51587 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BRCA2P51587 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
BRCA2P51587 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.84■□□□□ 0.29
BRCA2P51587 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.84■□□□□ 0.29
BRCA2P51587 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.84■□□□□ 0.29
BRCA2P51587 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BRCA2P51587 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
BRCA2P51587 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
BRCA2P51587 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
BRCA2P51587 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.83■□□□□ 0.29
BRCA2P51587 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
BRCA2P51587 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
BRCA2P51587 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
BRCA2P51587 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.83■□□□□ 0.29
BRCA2P51587 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
BRCA2P51587 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCA2P51587 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
BRCA2P51587 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRCA2P51587 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
BRCA2P51587 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCA2P51587 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BRCA2P51587 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCA2P51587 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRCA2P51587 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
BRCA2P51587 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.83■□□□□ 0.28
BRCA2P51587 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.83■□□□□ 0.28
BRCA2P51587 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BRCA2P51587 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.83■□□□□ 0.28
BRCA2P51587 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRCA2P51587 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.83■□□□□ 0.28
BRCA2P51587 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCA2P51587 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
BRCA2P51587 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.82■□□□□ 0.28
BRCA2P51587 PUDPP3-201ENST00000445368 636 ntBASIC16.82■□□□□ 0.28
BRCA2P51587 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.82■□□□□ 0.28
BRCA2P51587 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCA2P51587 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BRCA2P51587 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BRCA2P51587 REXO1L4P-201ENST00000605109 1937 ntBASIC16.82■□□□□ 0.28
BRCA2P51587 AC132872.4-202ENST00000622924 2756 ntBASIC16.82■□□□□ 0.28
BRCA2P51587 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 TNRC18P3-201ENST00000441896 2691 ntBASIC16.82■□□□□ 0.28
BRCA2P51587 FAM58BP-201ENST00000439056 645 ntBASIC16.82■□□□□ 0.28
BRCA2P51587 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCA2P51587 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 FAM90A2P-201ENST00000511144 1395 ntBASIC16.82■□□□□ 0.28
BRCA2P51587 FAM90A25P-201ENST00000528404 1395 ntBASIC16.82■□□□□ 0.28
BRCA2P51587 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCA2P51587 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.82■□□□□ 0.28
BRCA2P51587 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCA2P51587 AP000911.2-201ENST00000534330 502 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms