Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5CP51148 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAB5CP51148 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5CP51148 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB5CP51148 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 AL645929.1-201ENST00000420084 975 ntBASIC12.49□□□□□ -0.41
RAB5CP51148 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 MINOS1P3-201ENST00000457048 203 ntBASIC12.49□□□□□ -0.41
RAB5CP51148 YBX1P2-201ENST00000489612 999 ntBASIC12.49□□□□□ -0.41
RAB5CP51148 AC091607.1-201ENST00000490318 1060 ntBASIC12.49□□□□□ -0.41
RAB5CP51148 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 AC243562.2-201ENST00000561247 970 ntBASIC12.49□□□□□ -0.41
RAB5CP51148 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 MIR3909-201ENST00000579518 119 ntBASIC12.49□□□□□ -0.41
RAB5CP51148 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 AL022326.1-202ENST00000641533 845 ntBASIC12.49□□□□□ -0.41
RAB5CP51148 AP006294.2-201ENST00000641667 209 ntBASIC12.49□□□□□ -0.41
RAB5CP51148 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB5CP51148 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB5CP51148 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
RAB5CP51148 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RAB5CP51148 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB5CP51148 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 AC131212.3-201ENST00000624087 4219 ntBASIC12.48□□□□□ -0.41
RAB5CP51148 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB5CP51148 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB5CP51148 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB5CP51148 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB5CP51148 BX664615.1-201ENST00000443558 458 ntBASIC12.48□□□□□ -0.41
RAB5CP51148 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB5CP51148 SNORA78-201ENST00000459373 127 ntBASIC12.48□□□□□ -0.41
RAB5CP51148 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 KRT8P26-201ENST00000534154 1276 ntBASIC12.48□□□□□ -0.41
RAB5CP51148 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB5CP51148 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms