Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 AC136604.1-201ENST00000418535 575 ntBASIC16.63■□□□□ 0.25
PSEN1P49768 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.63■□□□□ 0.25
PSEN1P49768 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC16.63■□□□□ 0.25
PSEN1P49768 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.63■□□□□ 0.25
PSEN1P49768 DOC2GP-202ENST00000514950 1163 ntBASIC16.63■□□□□ 0.25
PSEN1P49768 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.63■□□□□ 0.25
PSEN1P49768 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC16.63■□□□□ 0.25
PSEN1P49768 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 AC027307.3-201ENST00000594262 1100 ntBASIC16.63■□□□□ 0.25
PSEN1P49768 AC005785.2-201ENST00000624655 631 ntBASIC16.63■□□□□ 0.25
PSEN1P49768 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PSEN1P49768 REXO1L2P-201ENST00000425429 2069 ntBASIC16.63■□□□□ 0.25
PSEN1P49768 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.63■□□□□ 0.25
PSEN1P49768 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSEN1P49768 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PSEN1P49768 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PSEN1P49768 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 AL356585.2-201ENST00000625078 2396 ntBASIC16.62■□□□□ 0.25
PSEN1P49768 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
PSEN1P49768 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PSEN1P49768 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.62■□□□□ 0.25
PSEN1P49768 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.62■□□□□ 0.25
PSEN1P49768 DFFBP1-201ENST00000433250 979 ntBASIC16.62■□□□□ 0.25
PSEN1P49768 AL353779.1-201ENST00000434793 351 ntBASIC16.62■□□□□ 0.25
PSEN1P49768 COX20P2-201ENST00000452636 358 ntBASIC16.62■□□□□ 0.25
PSEN1P49768 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC16.62■□□□□ 0.25
PSEN1P49768 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.62■□□□□ 0.25
PSEN1P49768 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 AC023510.2-201ENST00000622162 746 ntBASIC16.62■□□□□ 0.25
PSEN1P49768 AC002044.3-201ENST00000623314 541 ntBASIC16.62■□□□□ 0.25
PSEN1P49768 AC097655.1-201ENST00000635075 318 ntBASIC16.62■□□□□ 0.25
PSEN1P49768 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PSEN1P49768 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PSEN1P49768 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
PSEN1P49768 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.62■□□□□ 0.25
PSEN1P49768 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 AC083899.2-201ENST00000423285 1376 ntBASIC16.62■□□□□ 0.25
PSEN1P49768 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PSEN1P49768 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.62■□□□□ 0.25
PSEN1P49768 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PSEN1P49768 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PSEN1P49768 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PSEN1P49768 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSEN1P49768 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.61■□□□□ 0.25
PSEN1P49768 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms