Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LHX1P48742 MIR6775-201ENST00000617557 69 ntBASIC16.3■□□□□ 0.2
LHX1P48742 AC132938.4-201ENST00000623835 848 ntBASIC16.3■□□□□ 0.2
LHX1P48742 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 AC008741.2-201ENST00000612792 3115 ntBASIC16.3■□□□□ 0.2
LHX1P48742 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 AC148477.4-201ENST00000613430 1793 ntBASIC16.3■□□□□ 0.2
LHX1P48742 AC136621.1-201ENST00000624017 2304 ntBASIC16.3■□□□□ 0.2
LHX1P48742 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LHX1P48742 LRRC59-203ENST00000576448 1531 ntBASIC16.29■□□□□ 0.2
LHX1P48742 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX1P48742 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LHX1P48742 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.29■□□□□ 0.2
LHX1P48742 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LHX1P48742 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX1P48742 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.29■□□□□ 0.2
LHX1P48742 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LHX1P48742 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LHX1P48742 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.29■□□□□ 0.2
LHX1P48742 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.29■□□□□ 0.2
LHX1P48742 RPL7P3-201ENST00000441388 714 ntBASIC16.29■□□□□ 0.2
LHX1P48742 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 CTBP2P5-201ENST00000454986 1264 ntBASIC16.29■□□□□ 0.2
LHX1P48742 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.29■□□□□ 0.2
LHX1P48742 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LHX1P48742 AC133552.6-201ENST00000613406 534 ntBASIC16.29■□□□□ 0.2
LHX1P48742 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LHX1P48742 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
LHX1P48742 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.29■□□□□ 0.2
LHX1P48742 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 AC112693.3-201ENST00000624819 1983 ntBASIC16.29■□□□□ 0.2
LHX1P48742 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LHX1P48742 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX1P48742 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LHX1P48742 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX1P48742 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LHX1P48742 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX1P48742 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX1P48742 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX1P48742 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
LHX1P48742 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX1P48742 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.28■□□□□ 0.2
LHX1P48742 SNX29P1-201ENST00000548357 1007 ntBASIC16.28■□□□□ 0.2
LHX1P48742 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX1P48742 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX1P48742 MIR6752-201ENST00000618442 71 ntBASIC16.28■□□□□ 0.2
LHX1P48742 AL603764.1-201ENST00000636452 321 ntBASIC16.28■□□□□ 0.2
LHX1P48742 COX11-210ENST00000639671 696 ntBASIC16.28■□□□□ 0.2
LHX1P48742 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LHX1P48742 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX1P48742 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 AC126365.1-201ENST00000578585 1514 ntBASIC16.28■□□□□ 0.2
LHX1P48742 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms