Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 AC006486.2-201ENST00000624246 2199 ntBASIC13.81□□□□□ -0.2
CSNK1A1P48729 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 AC099063.4-201ENST00000641099 1602 ntBASIC13.8□□□□□ -0.2
CSNK1A1P48729 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 SPDYE18-201ENST00000510091 1050 ntBASIC13.8□□□□□ -0.2
CSNK1A1P48729 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK1A1P48729 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK1A1P48729 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 MRPS18AP1-201ENST00000414458 589 ntBASIC13.79□□□□□ -0.2
CSNK1A1P48729 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 AL158212.4-201ENST00000624062 1286 ntBASIC13.79□□□□□ -0.2
CSNK1A1P48729 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK1A1P48729 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK1A1P48729 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms