Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC1A3P43003 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC1A3P43003 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
SLC1A3P43003 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.27□□□□□ -0.12
SLC1A3P43003 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.27□□□□□ -0.12
SLC1A3P43003 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.27□□□□□ -0.12
SLC1A3P43003 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SLC1A3P43003 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 AC100757.3-201ENST00000622361 1406 ntBASIC14.27□□□□□ -0.12
SLC1A3P43003 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC1A3P43003 LINC00552-201ENST00000625151 2579 ntBASIC14.27□□□□□ -0.13
SLC1A3P43003 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SLC1A3P43003 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC1A3P43003 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 RPL13P2-201ENST00000440687 659 ntBASIC14.27□□□□□ -0.13
SLC1A3P43003 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.27□□□□□ -0.13
SLC1A3P43003 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC1A3P43003 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SLC1A3P43003 AL590560.3-201ENST00000623350 461 ntBASIC14.27□□□□□ -0.13
SLC1A3P43003 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SLC1A3P43003 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 LINC00528-201ENST00000600723 2160 ntBASIC14.27□□□□□ -0.13
SLC1A3P43003 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC1A3P43003 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC1A3P43003 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SLC1A3P43003 AC007191.1-201ENST00000623179 2995 ntBASIC14.27□□□□□ -0.13
SLC1A3P43003 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC1A3P43003 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLC1A3P43003 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
SLC1A3P43003 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC1A3P43003 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC1A3P43003 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.26□□□□□ -0.13
SLC1A3P43003 RPL5P21-201ENST00000404620 815 ntBASIC14.26□□□□□ -0.13
SLC1A3P43003 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 AC015922.1-201ENST00000421102 1152 ntBASIC14.26□□□□□ -0.13
SLC1A3P43003 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC1A3P43003 AC241585.1-201ENST00000433527 519 ntBASIC14.26□□□□□ -0.13
SLC1A3P43003 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.26□□□□□ -0.13
SLC1A3P43003 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC1A3P43003 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC1A3P43003 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC1A3P43003 DUX4L27-201ENST00000554796 1261 ntBASIC14.26□□□□□ -0.13
SLC1A3P43003 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC1A3P43003 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
SLC1A3P43003 AL109936.8-201ENST00000641772 604 ntBASIC14.26□□□□□ -0.13
SLC1A3P43003 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC1A3P43003 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC1A3P43003 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC1A3P43003 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms