Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PBX3P40426 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PBX3P40426 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PBX3P40426 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PBX3P40426 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 PCDHA1-201ENST00000378133 2726 ntBASIC16.4■□□□□ 0.22
PBX3P40426 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PBX3P40426 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PBX3P40426 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.4■□□□□ 0.22
PBX3P40426 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PBX3P40426 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 MIR663B-201ENST00000408361 115 ntBASIC16.4■□□□□ 0.22
PBX3P40426 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.4■□□□□ 0.22
PBX3P40426 NUS1P3-201ENST00000423502 862 ntBASIC16.4■□□□□ 0.22
PBX3P40426 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.4■□□□□ 0.22
PBX3P40426 FAM8A4P-201ENST00000435433 1213 ntBASIC16.4■□□□□ 0.22
PBX3P40426 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.4■□□□□ 0.22
PBX3P40426 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 HSPB1P2-201ENST00000448722 546 ntBASIC16.4■□□□□ 0.22
PBX3P40426 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.4■□□□□ 0.22
PBX3P40426 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.4■□□□□ 0.22
PBX3P40426 AC004066.1-201ENST00000502488 802 ntBASIC16.4■□□□□ 0.22
PBX3P40426 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PBX3P40426 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.4■□□□□ 0.22
PBX3P40426 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PBX3P40426 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PBX3P40426 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
PBX3P40426 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
PBX3P40426 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PBX3P40426 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 KRT8P14-201ENST00000414254 1442 ntBASIC16.39■□□□□ 0.21
PBX3P40426 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PBX3P40426 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PBX3P40426 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.39■□□□□ 0.21
PBX3P40426 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
PBX3P40426 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.39■□□□□ 0.21
PBX3P40426 AC091804.1-201ENST00000486888 567 ntBASIC16.39■□□□□ 0.21
PBX3P40426 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.39■□□□□ 0.21
PBX3P40426 COX5BP1-201ENST00000507622 393 ntBASIC16.39■□□□□ 0.21
PBX3P40426 SCARNA20.5-201ENST00000516991 142 ntBASIC16.39■□□□□ 0.21
PBX3P40426 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.39■□□□□ 0.21
PBX3P40426 AP003171.2-201ENST00000528208 925 ntBASIC16.39■□□□□ 0.21
PBX3P40426 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
PBX3P40426 PPY2P-201ENST00000582808 702 ntBASIC16.39■□□□□ 0.21
PBX3P40426 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PBX3P40426 AC020914.3-201ENST00000594712 304 ntBASIC16.39■□□□□ 0.21
PBX3P40426 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.39■□□□□ 0.21
PBX3P40426 OR10B1P-201ENST00000601666 907 ntBASIC16.39■□□□□ 0.21
PBX3P40426 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.39■□□□□ 0.21
PBX3P40426 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.39■□□□□ 0.21
PBX3P40426 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PBX3P40426 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PBX3P40426 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.39■□□□□ 0.21
PBX3P40426 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms