Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.82■□□□□ 0.6
PDE6BP35913 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PDE6BP35913 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PDE6BP35913 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 RN7SKP214-201ENST00000364208 315 ntBASIC18.82■□□□□ 0.6
PDE6BP35913 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PDE6BP35913 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.82■□□□□ 0.6
PDE6BP35913 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6BP35913 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 AC019193.1-201ENST00000506678 823 ntBASIC18.82■□□□□ 0.6
PDE6BP35913 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6BP35913 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 MIR4783-201ENST00000580343 82 ntBASIC18.82■□□□□ 0.6
PDE6BP35913 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.82■□□□□ 0.6
PDE6BP35913 AC006453.1-201ENST00000636037 1257 ntBASIC18.82■□□□□ 0.6
PDE6BP35913 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PDE6BP35913 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDE6BP35913 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDE6BP35913 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDE6BP35913 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.81■□□□□ 0.6
PDE6BP35913 PDIA3P2-201ENST00000428073 158 ntBASIC18.81■□□□□ 0.6
PDE6BP35913 HLA-K-203ENST00000430151 1046 ntBASIC18.81■□□□□ 0.6
PDE6BP35913 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 CEP164P1-201ENST00000455142 418 ntBASIC18.81■□□□□ 0.6
PDE6BP35913 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PDE6BP35913 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
PDE6BP35913 SNORD3B-2-202ENST00000571722 791 ntBASIC18.81■□□□□ 0.6
PDE6BP35913 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 AC012044.1-201ENST00000603431 297 ntBASIC18.81■□□□□ 0.6
PDE6BP35913 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.81■□□□□ 0.6
PDE6BP35913 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.81■□□□□ 0.6
PDE6BP35913 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDE6BP35913 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.81■□□□□ 0.6
PDE6BP35913 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDE6BP35913 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.81■□□□□ 0.6
PDE6BP35913 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.81■□□□□ 0.6
PDE6BP35913 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDE6BP35913 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDE6BP35913 AC026316.1-201ENST00000398900 414 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 ISCA2P1-201ENST00000425548 448 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 FAM58BP-201ENST00000439056 645 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.8■□□□□ 0.6
PDE6BP35913 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.8■□□□□ 0.6
PDE6BP35913 RTN3P1-201ENST00000536295 711 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 AL160314.3-201ENST00000556041 767 ntBASIC18.8■□□□□ 0.6
PDE6BP35913 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.8■□□□□ 0.6
PDE6BP35913 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.8■□□□□ 0.6
PDE6BP35913 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.8■□□□□ 0.6
PDE6BP35913 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms