Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.25□□□□□ -0.13
ABCD3P28288 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.25□□□□□ -0.13
ABCD3P28288 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 AC093813.1-201ENST00000605066 256 ntBASIC14.25□□□□□ -0.13
ABCD3P28288 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ABCD3P28288 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ABCD3P28288 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.24□□□□□ -0.13
ABCD3P28288 RN7SL752P-201ENST00000463779 287 ntBASIC14.24□□□□□ -0.13
ABCD3P28288 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.24□□□□□ -0.13
ABCD3P28288 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.24□□□□□ -0.13
ABCD3P28288 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.24□□□□□ -0.13
ABCD3P28288 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.24□□□□□ -0.13
ABCD3P28288 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 AL033527.5-201ENST00000641382 801 ntBASIC14.24□□□□□ -0.13
ABCD3P28288 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ABCD3P28288 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ABCD3P28288 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ABCD3P28288 KRT8P22-201ENST00000562317 1415 ntBASIC14.24□□□□□ -0.13
ABCD3P28288 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.24□□□□□ -0.13
ABCD3P28288 AL138799.1-201ENST00000448213 1675 ntBASIC14.23□□□□□ -0.13
ABCD3P28288 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
ABCD3P28288 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ABCD3P28288 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ABCD3P28288 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.23□□□□□ -0.13
ABCD3P28288 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.23□□□□□ -0.13
ABCD3P28288 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.23□□□□□ -0.13
ABCD3P28288 AL162726.2-201ENST00000438986 1017 ntBASIC14.23□□□□□ -0.13
ABCD3P28288 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.23□□□□□ -0.13
ABCD3P28288 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.23□□□□□ -0.13
ABCD3P28288 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.23□□□□□ -0.13
ABCD3P28288 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.23□□□□□ -0.13
ABCD3P28288 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.23□□□□□ -0.13
ABCD3P28288 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms