Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NFKB1P19838 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NFKB1P19838 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.74■□□□□ 0.11
NFKB1P19838 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NFKB1P19838 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.74■□□□□ 0.11
NFKB1P19838 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.74■□□□□ 0.11
NFKB1P19838 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NFKB1P19838 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NFKB1P19838 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.74■□□□□ 0.11
NFKB1P19838 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NFKB1P19838 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.73■□□□□ 0.11
NFKB1P19838 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.73■□□□□ 0.11
NFKB1P19838 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.73■□□□□ 0.11
NFKB1P19838 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.73■□□□□ 0.11
NFKB1P19838 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NFKB1P19838 ZBED1P1-201ENST00000502364 1930 ntBASIC15.73■□□□□ 0.11
NFKB1P19838 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.73■□□□□ 0.11
NFKB1P19838 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.73■□□□□ 0.11
NFKB1P19838 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 DOC2GP-202ENST00000514950 1163 ntBASIC15.73■□□□□ 0.11
NFKB1P19838 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
NFKB1P19838 AC023310.3-201ENST00000557027 670 ntBASIC15.73■□□□□ 0.11
NFKB1P19838 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.73■□□□□ 0.11
NFKB1P19838 AC100756.1-201ENST00000562736 682 ntBASIC15.73■□□□□ 0.11
NFKB1P19838 AC138749.3-201ENST00000567691 622 ntBASIC15.73■□□□□ 0.11
NFKB1P19838 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.73■□□□□ 0.11
NFKB1P19838 AC116165.1-201ENST00000611806 668 ntBASIC15.73■□□□□ 0.11
NFKB1P19838 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
NFKB1P19838 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.73■□□□□ 0.11
NFKB1P19838 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
NFKB1P19838 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 WASH3P-207ENST00000560956 1394 ntBASIC15.73■□□□□ 0.11
NFKB1P19838 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 AP000845.1-201ENST00000581677 2131 ntBASIC15.73■□□□□ 0.11
NFKB1P19838 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NFKB1P19838 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NFKB1P19838 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
NFKB1P19838 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NFKB1P19838 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.72■□□□□ 0.11
NFKB1P19838 SPDYE19P-201ENST00000338590 713 ntBASIC15.72■□□□□ 0.11
NFKB1P19838 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.72■□□□□ 0.11
NFKB1P19838 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.72■□□□□ 0.11
NFKB1P19838 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.72■□□□□ 0.11
NFKB1P19838 GNAQP1-201ENST00000444815 1067 ntBASIC15.72■□□□□ 0.11
NFKB1P19838 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.72■□□□□ 0.11
NFKB1P19838 INGX-202ENST00000489074 768 ntBASIC15.72■□□□□ 0.11
NFKB1P19838 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.72■□□□□ 0.11
NFKB1P19838 TPRX2P-201ENST00000535362 881 ntBASIC15.72■□□□□ 0.11
NFKB1P19838 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.72■□□□□ 0.11
NFKB1P19838 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.72■□□□□ 0.11
NFKB1P19838 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.72■□□□□ 0.11
NFKB1P19838 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NFKB1P19838 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.72■□□□□ 0.11
NFKB1P19838 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
NFKB1P19838 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
NFKB1P19838 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.72■□□□□ 0.11
NFKB1P19838 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.72■□□□□ 0.11
NFKB1P19838 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms