Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VCLP18206 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.62■□□□□ 0.09
VCLP18206 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.62■□□□□ 0.09
VCLP18206 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.62■□□□□ 0.09
VCLP18206 AC002472.2-201ENST00000442739 958 ntBASIC15.62■□□□□ 0.09
VCLP18206 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VCLP18206 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.62■□□□□ 0.09
VCLP18206 AC025048.3-201ENST00000590609 569 ntBASIC15.62■□□□□ 0.09
VCLP18206 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 LINC02560-201ENST00000596379 459 ntBASIC15.62■□□□□ 0.09
VCLP18206 AC008738.7-201ENST00000609744 511 ntBASIC15.62■□□□□ 0.09
VCLP18206 AC005702.4-201ENST00000618393 416 ntBASIC15.62■□□□□ 0.09
VCLP18206 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.62■□□□□ 0.09
VCLP18206 AC008761.3-201ENST00000624803 892 ntBASIC15.62■□□□□ 0.09
VCLP18206 AL109936.8-201ENST00000641772 604 ntBASIC15.62■□□□□ 0.09
VCLP18206 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.62■□□□□ 0.09
VCLP18206 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.62■□□□□ 0.09
VCLP18206 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.62■□□□□ 0.09
VCLP18206 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VCLP18206 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.61■□□□□ 0.09
VCLP18206 AC018892.3-201ENST00000623986 2499 ntBASIC15.61■□□□□ 0.09
VCLP18206 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.61■□□□□ 0.09
VCLP18206 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.61■□□□□ 0.09
VCLP18206 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 AC020658.6-201ENST00000623564 1870 ntBASIC15.61■□□□□ 0.09
VCLP18206 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
VCLP18206 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 TMBIM7P-203ENST00000641617 1718 ntBASIC15.61■□□□□ 0.09
VCLP18206 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 AC236430.1-201ENST00000402231 743 ntBASIC15.61■□□□□ 0.09
VCLP18206 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VCLP18206 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VCLP18206 AC114501.2-201ENST00000439631 535 ntBASIC15.61■□□□□ 0.09
VCLP18206 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.61■□□□□ 0.09
VCLP18206 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.61■□□□□ 0.09
VCLP18206 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.61■□□□□ 0.09
VCLP18206 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.61■□□□□ 0.09
VCLP18206 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
VCLP18206 RN7SL204P-201ENST00000582831 262 ntBASIC15.61■□□□□ 0.09
VCLP18206 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.61■□□□□ 0.09
VCLP18206 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.61■□□□□ 0.09
VCLP18206 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.61■□□□□ 0.09
VCLP18206 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
VCLP18206 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VCLP18206 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.61■□□□□ 0.09
VCLP18206 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCLP18206 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
VCLP18206 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCLP18206 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCLP18206 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.6■□□□□ 0.09
VCLP18206 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VCLP18206 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
VCLP18206 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCLP18206 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.6■□□□□ 0.09
VCLP18206 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCLP18206 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCLP18206 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCLP18206 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCLP18206 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCLP18206 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms