Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTPN1P18031 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.34■□□□□ 0.21
PTPN1P18031 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN1P18031 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PTPN1P18031 AC112492.5-201ENST00000421897 457 ntBASIC16.34■□□□□ 0.21
PTPN1P18031 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN1P18031 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN1P18031 AC012441.1-201ENST00000446669 685 ntBASIC16.34■□□□□ 0.21
PTPN1P18031 AP001889.1-201ENST00000525414 633 ntBASIC16.34■□□□□ 0.21
PTPN1P18031 SAMD11P1-201ENST00000571429 661 ntBASIC16.34■□□□□ 0.21
PTPN1P18031 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN1P18031 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN1P18031 AP005019.2-201ENST00000615104 511 ntBASIC16.34■□□□□ 0.21
PTPN1P18031 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN1P18031 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PTPN1P18031 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN1P18031 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN1P18031 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN1P18031 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN1P18031 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN1P18031 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN1P18031 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN1P18031 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.34■□□□□ 0.21
PTPN1P18031 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN1P18031 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN1P18031 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN1P18031 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PTPN1P18031 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
PTPN1P18031 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.33■□□□□ 0.21
PTPN1P18031 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN1P18031 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN1P18031 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN1P18031 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN1P18031 AC112693.3-201ENST00000624819 1983 ntBASIC16.33■□□□□ 0.21
PTPN1P18031 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN1P18031 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.33■□□□□ 0.21
PTPN1P18031 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.33■□□□□ 0.21
PTPN1P18031 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PTPN1P18031 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PTPN1P18031 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN1P18031 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 AC079776.1-201ENST00000401540 1152 ntBASIC16.33■□□□□ 0.2
PTPN1P18031 NUS1P3-201ENST00000423502 862 ntBASIC16.33■□□□□ 0.2
PTPN1P18031 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN1P18031 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN1P18031 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN1P18031 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 AC022137.2-201ENST00000503482 481 ntBASIC16.33■□□□□ 0.2
PTPN1P18031 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN1P18031 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN1P18031 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN1P18031 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN1P18031 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTPN1P18031 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.33■□□□□ 0.2
PTPN1P18031 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN1P18031 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 OR8S1-201ENST00000310194 1080 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN1P18031 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN1P18031 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN1P18031 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PTPN1P18031 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 AC005229.1-201ENST00000392885 409 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 AC104457.1-201ENST00000401024 814 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN1P18031 BCRP2-202ENST00000447763 634 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN1P18031 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PTPN1P18031 BCRP6-201ENST00000510112 632 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 BCRP7-201ENST00000511549 544 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN1P18031 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN1P18031 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PTPN1P18031 RAB43P1-201ENST00000561790 589 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN1P18031 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN1P18031 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN1P18031 AC018665.1-201ENST00000622927 1362 ntBASIC16.32■□□□□ 0.2
PTPN1P18031 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN1P18031 PRSS30P-206ENST00000641773 873 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms