Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL3L1P16619 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 AL391825.1-201ENST00000457671 1364 ntBASIC12.78□□□□□ -0.36
CCL3L1P16619 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL3L1P16619 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL3L1P16619 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL3L1P16619 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCL3L1P16619 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL3L1P16619 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.77□□□□□ -0.36
CCL3L1P16619 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
CCL3L1P16619 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.77□□□□□ -0.36
CCL3L1P16619 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CCL3L1P16619 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL3L1P16619 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL3L1P16619 MYCLP2-201ENST00000449268 967 ntBASIC12.77□□□□□ -0.37
CCL3L1P16619 VDAC1P7-201ENST00000462417 847 ntBASIC12.77□□□□□ -0.37
CCL3L1P16619 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL3L1P16619 AC140912.1-201ENST00000577171 1054 ntBASIC12.77□□□□□ -0.37
CCL3L1P16619 MIR3197-201ENST00000582241 73 ntBASIC12.77□□□□□ -0.37
CCL3L1P16619 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL3L1P16619 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 AC023024.2-201ENST00000623561 1993 ntBASIC12.77□□□□□ -0.37
CCL3L1P16619 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL3L1P16619 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CCL3L1P16619 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.77□□□□□ -0.37
CCL3L1P16619 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.76□□□□□ -0.37
CCL3L1P16619 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CCL3L1P16619 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CCL3L1P16619 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CCL3L1P16619 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
CCL3L1P16619 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 AC104640.1-201ENST00000562617 2109 ntBASIC12.76□□□□□ -0.37
CCL3L1P16619 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CCL3L1P16619 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3L1P16619 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CCL3L1P16619 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CCL3L1P16619 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3L1P16619 AC091951.1-201ENST00000512854 2465 ntBASIC12.76□□□□□ -0.37
CCL3L1P16619 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.76□□□□□ -0.37
CCL3L1P16619 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.76□□□□□ -0.37
CCL3L1P16619 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CCL3L1P16619 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.76□□□□□ -0.37
CCL3L1P16619 CRB3P1-201ENST00000449338 276 ntBASIC12.76□□□□□ -0.37
CCL3L1P16619 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms