Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DQA2P01906 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HLA-DQA2P01906 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 AC097359.3-201ENST00000603982 1210 ntBASIC13.96□□□□□ -0.17
HLA-DQA2P01906 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 MIR6080-201ENST00000617359 66 ntBASIC13.96□□□□□ -0.17
HLA-DQA2P01906 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DQA2P01906 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 MST1L-201ENST00000442552 2185 ntBASIC13.96□□□□□ -0.18
HLA-DQA2P01906 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 AL031595.1-201ENST00000623969 4709 ntBASIC13.96□□□□□ -0.18
HLA-DQA2P01906 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 KRT8P44-201ENST00000441609 1350 ntBASIC13.96□□□□□ -0.18
HLA-DQA2P01906 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DQA2P01906 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 BX842568.4-201ENST00000421222 227 ntBASIC13.95□□□□□ -0.18
HLA-DQA2P01906 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 AC026150.2-201ENST00000564693 1156 ntBASIC13.95□□□□□ -0.18
HLA-DQA2P01906 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 AL671883.3-201ENST00000603274 991 ntBASIC13.95□□□□□ -0.18
HLA-DQA2P01906 RN7SL828P-201ENST00000607615 303 ntBASIC13.95□□□□□ -0.18
HLA-DQA2P01906 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DQA2P01906 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms