Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL132655.2-201ENST00000596276 594 ntBASIC14.25□□□□□ -0.13
NKX2-2O95096 AL355385.1-201ENST00000606123 409 ntBASIC14.25□□□□□ -0.13
NKX2-2O95096 MIR8072-201ENST00000614241 80 ntBASIC14.25□□□□□ -0.13
NKX2-2O95096 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-2O95096 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NKX2-2O95096 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-2O95096 AC008761.3-201ENST00000624803 892 ntBASIC14.25□□□□□ -0.13
NKX2-2O95096 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-2O95096 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-2O95096 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-2O95096 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-2O95096 AC007787.1-201ENST00000588095 1583 ntBASIC14.25□□□□□ -0.13
NKX2-2O95096 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NKX2-2O95096 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-2O95096 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-2O95096 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-2O95096 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-2O95096 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX2-2O95096 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-2O95096 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NKX2-2O95096 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NKX2-2O95096 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX2-2O95096 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX2-2O95096 AL138799.1-201ENST00000448213 1675 ntBASIC14.24□□□□□ -0.13
NKX2-2O95096 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
NKX2-2O95096 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NKX2-2O95096 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NKX2-2O95096 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-2O95096 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NKX2-2O95096 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 AL353779.1-201ENST00000434793 351 ntBASIC14.24□□□□□ -0.13
NKX2-2O95096 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX2-2O95096 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-2O95096 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX2-2O95096 AC093813.1-201ENST00000605066 256 ntBASIC14.24□□□□□ -0.13
NKX2-2O95096 AC004233.3-201ENST00000607794 1269 ntBASIC14.24□□□□□ -0.13
NKX2-2O95096 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-2O95096 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
NKX2-2O95096 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-2O95096 AC068587.6-202ENST00000641839 5619 ntBASIC14.24□□□□□ -0.13
NKX2-2O95096 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NKX2-2O95096 AC007541.1-201ENST00000570282 1469 ntBASIC14.24□□□□□ -0.13
NKX2-2O95096 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-2O95096 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-2O95096 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-2O95096 ACE3P-201ENST00000423435 1973 ntBASIC14.23□□□□□ -0.13
NKX2-2O95096 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-2O95096 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NKX2-2O95096 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-2O95096 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-2O95096 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-2O95096 AC087499.6-201ENST00000411576 835 ntBASIC14.23□□□□□ -0.13
NKX2-2O95096 AL442647.2-201ENST00000429864 857 ntBASIC14.23□□□□□ -0.13
NKX2-2O95096 AC002472.2-201ENST00000442739 958 ntBASIC14.23□□□□□ -0.13
NKX2-2O95096 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-2O95096 AC123567.1-201ENST00000548294 1261 ntBASIC14.23□□□□□ -0.13
NKX2-2O95096 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.23□□□□□ -0.13
NKX2-2O95096 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 INTS4P2-202ENST00000614726 2019 ntBASIC14.23□□□□□ -0.13
NKX2-2O95096 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-2O95096 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NKX2-2O95096 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-2O95096 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-2O95096 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms