Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 AL138725.1-201ENST00000407347 1314 ntBASIC6.7□□□□□ -1.34
USH2AO75445 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
USH2AO75445 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
USH2AO75445 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC6.7□□□□□ -1.34
USH2AO75445 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 CISD2-202ENST00000503643 808 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 PHBP15-201ENST00000574228 665 ntBASIC6.7□□□□□ -1.34
USH2AO75445 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC6.7□□□□□ -1.34
USH2AO75445 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC6.7□□□□□ -1.34
USH2AO75445 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC6.7□□□□□ -1.34
USH2AO75445 LSM5-207ENST00000410044 687 ntTSL 3 BASIC6.7□□□□□ -1.34
USH2AO75445 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC6.7□□□□□ -1.34
USH2AO75445 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 AC002472.3-201ENST00000640124 621 ntBASIC6.7□□□□□ -1.34
USH2AO75445 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 PPIA-208ENST00000489459 907 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC6.7□□□□□ -1.34
USH2AO75445 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC6.7□□□□□ -1.34
USH2AO75445 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 PPIA-210ENST00000620047 827 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 BANP-227ENST00000626016 2144 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 HLF-202ENST00000430986 1385 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
USH2AO75445 HLA-DMA-203ENST00000395305 777 ntBASIC6.7□□□□□ -1.34
USH2AO75445 AL645937.2-201ENST00000396808 931 ntBASIC6.7□□□□□ -1.34
USH2AO75445 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC6.7□□□□□ -1.34
USH2AO75445 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 HNRNPA1P36-201ENST00000521313 955 ntBASIC6.7□□□□□ -1.34
USH2AO75445 USB1-205ENST00000561743 1135 ntTSL 3 BASIC6.7□□□□□ -1.34
USH2AO75445 AC020922.4-201ENST00000621389 339 ntBASIC6.7□□□□□ -1.34
USH2AO75445 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 ZNF436-AS1-201ENST00000335648 2547 ntBASIC6.7□□□□□ -1.34
USH2AO75445 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms