Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CPNE3O75131 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CPNE3O75131 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CPNE3O75131 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.94□□□□□ -0.02
CPNE3O75131 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CPNE3O75131 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CPNE3O75131 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CPNE3O75131 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.94□□□□□ -0.02
CPNE3O75131 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CPNE3O75131 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.94□□□□□ -0.02
CPNE3O75131 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CPNE3O75131 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 KRT8P22-201ENST00000562317 1415 ntBASIC14.93□□□□□ -0.02
CPNE3O75131 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CPNE3O75131 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CPNE3O75131 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
CPNE3O75131 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CPNE3O75131 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 KRT18P64-201ENST00000434946 1219 ntBASIC14.93□□□□□ -0.02
CPNE3O75131 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.93□□□□□ -0.02
CPNE3O75131 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.93□□□□□ -0.02
CPNE3O75131 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC14.93□□□□□ -0.02
CPNE3O75131 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE3O75131 BRI3BPP1-201ENST00000594224 787 ntBASIC14.93□□□□□ -0.02
CPNE3O75131 AC008735.3-201ENST00000596646 500 ntBASIC14.93□□□□□ -0.02
CPNE3O75131 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE3O75131 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE3O75131 CU634019.7-201ENST00000624153 1185 ntBASIC14.93□□□□□ -0.02
CPNE3O75131 FP236241.2-201ENST00000624906 1185 ntBASIC14.93□□□□□ -0.02
CPNE3O75131 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CPNE3O75131 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.93□□□□□ -0.02
CPNE3O75131 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.93□□□□□ -0.02
CPNE3O75131 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CPNE3O75131 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CPNE3O75131 AC007326.2-201ENST00000624224 7579 ntBASIC14.92□□□□□ -0.02
CPNE3O75131 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CPNE3O75131 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.92□□□□□ -0.02
CPNE3O75131 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 KRT43P-201ENST00000434019 910 ntBASIC14.92□□□□□ -0.02
CPNE3O75131 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.92□□□□□ -0.02
CPNE3O75131 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.92□□□□□ -0.02
CPNE3O75131 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
CPNE3O75131 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE3O75131 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CPNE3O75131 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.92□□□□□ -0.02
CPNE3O75131 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CPNE3O75131 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.92□□□□□ -0.02
CPNE3O75131 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms