Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.04□□□□□ -0.48
PDE6DO43924 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
PDE6DO43924 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
PDE6DO43924 AC131212.3-201ENST00000624087 4219 ntBASIC12.04□□□□□ -0.48
PDE6DO43924 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.04□□□□□ -0.48
PDE6DO43924 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 AC005521.1-201ENST00000393351 872 ntBASIC12.04□□□□□ -0.48
PDE6DO43924 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
PDE6DO43924 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.04□□□□□ -0.48
PDE6DO43924 AC022616.7-201ENST00000525383 220 ntBASIC12.04□□□□□ -0.48
PDE6DO43924 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 AC012615.1-201ENST00000565797 1299 ntBASIC12.04□□□□□ -0.48
PDE6DO43924 AL031432.2-201ENST00000566714 459 ntBASIC12.04□□□□□ -0.48
PDE6DO43924 AL928711.1-201ENST00000570165 459 ntBASIC12.04□□□□□ -0.48
PDE6DO43924 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 AP002414.4-201ENST00000589764 1148 ntBASIC12.04□□□□□ -0.48
PDE6DO43924 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.04□□□□□ -0.48
PDE6DO43924 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.04□□□□□ -0.48
PDE6DO43924 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.04□□□□□ -0.48
PDE6DO43924 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PDE6DO43924 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
PDE6DO43924 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PDE6DO43924 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PDE6DO43924 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
PDE6DO43924 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 AC018442.1-201ENST00000421439 2061 ntBASIC12.03□□□□□ -0.48
PDE6DO43924 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.03□□□□□ -0.48
PDE6DO43924 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.03□□□□□ -0.48
PDE6DO43924 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.03□□□□□ -0.48
PDE6DO43924 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 AC069148.1-201ENST00000608741 768 ntBASIC12.03□□□□□ -0.48
PDE6DO43924 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.03□□□□□ -0.48
PDE6DO43924 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.03□□□□□ -0.48
PDE6DO43924 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PDE6DO43924 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms