Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF13O43567 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 AC004449.1-201ENST00000564240 433 ntBASIC14.15□□□□□ -0.14
RNF13O43567 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.15□□□□□ -0.14
RNF13O43567 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 MIR6069-201ENST00000620069 79 ntBASIC14.15□□□□□ -0.14
RNF13O43567 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF13O43567 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF13O43567 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF13O43567 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RNF13O43567 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RNF13O43567 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF13O43567 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RNF13O43567 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF13O43567 MROH4P-201ENST00000431302 1578 ntBASIC14.14□□□□□ -0.15
RNF13O43567 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 SBF1P1-201ENST00000444527 5631 ntBASIC14.14□□□□□ -0.15
RNF13O43567 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF13O43567 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RNF13O43567 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
RNF13O43567 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 HIST3H2BA-201ENST00000436555 524 ntBASIC14.14□□□□□ -0.15
RNF13O43567 CNN2P2-201ENST00000443536 909 ntBASIC14.14□□□□□ -0.15
RNF13O43567 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RNF13O43567 CNN2P3-201ENST00000450201 906 ntBASIC14.14□□□□□ -0.15
RNF13O43567 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.14□□□□□ -0.15
RNF13O43567 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 AC109322.1-201ENST00000524499 1264 ntBASIC14.14□□□□□ -0.15
RNF13O43567 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 AC025678.2-201ENST00000562061 970 ntBASIC14.14□□□□□ -0.15
RNF13O43567 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RNF13O43567 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.14□□□□□ -0.15
RNF13O43567 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RNF13O43567 AL136317.3-201ENST00000618497 906 ntBASIC14.14□□□□□ -0.15
RNF13O43567 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
RNF13O43567 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RNF13O43567 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNF13O43567 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNF13O43567 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.14□□□□□ -0.15
RNF13O43567 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RNF13O43567 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RNF13O43567 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RNF13O43567 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 GRK6P1-201ENST00000400595 1711 ntBASIC14.13□□□□□ -0.15
RNF13O43567 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms