Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN1O15353 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN1O15353 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN1O15353 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXN1O15353 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXN1O15353 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.41■□□□□ 0.54
FOXN1O15353 RPL13P2-201ENST00000440687 659 ntBASIC18.41■□□□□ 0.54
FOXN1O15353 VDAC1P7-201ENST00000462417 847 ntBASIC18.41■□□□□ 0.54
FOXN1O15353 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXN1O15353 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
FOXN1O15353 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN1O15353 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 AP005117.1-202ENST00000581724 1908 ntBASIC18.41■□□□□ 0.54
FOXN1O15353 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN1O15353 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN1O15353 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXN1O15353 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 RN7SL8P-201ENST00000461771 266 ntBASIC18.4■□□□□ 0.54
FOXN1O15353 AC022137.2-201ENST00000503482 481 ntBASIC18.4■□□□□ 0.54
FOXN1O15353 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXN1O15353 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXN1O15353 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
FOXN1O15353 DGAT2L7P-201ENST00000602462 744 ntBASIC18.4■□□□□ 0.54
FOXN1O15353 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN1O15353 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN1O15353 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN1O15353 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN1O15353 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
FOXN1O15353 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.39■□□□□ 0.54
FOXN1O15353 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN1O15353 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.39■□□□□ 0.54
FOXN1O15353 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.39■□□□□ 0.54
FOXN1O15353 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN1O15353 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN1O15353 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
FOXN1O15353 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXN1O15353 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FOXN1O15353 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXN1O15353 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
FOXN1O15353 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXN1O15353 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN1O15353 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXN1O15353 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXN1O15353 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXN1O15353 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXN1O15353 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms