Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.29■□□□□ 0.84
APAF1O14727 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
APAF1O14727 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
APAF1O14727 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APAF1O14727 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.29■□□□□ 0.84
APAF1O14727 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
APAF1O14727 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
APAF1O14727 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
APAF1O14727 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 AC004066.1-201ENST00000502488 802 ntBASIC20.28■□□□□ 0.84
APAF1O14727 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.28■□□□□ 0.84
APAF1O14727 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.28■□□□□ 0.84
APAF1O14727 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.28■□□□□ 0.84
APAF1O14727 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
APAF1O14727 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
APAF1O14727 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.28■□□□□ 0.84
APAF1O14727 RER1-203ENST00000378513 3000 ntTSL 3 BASIC20.28■□□□□ 0.84
APAF1O14727 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
APAF1O14727 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APAF1O14727 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.27■□□□□ 0.84
APAF1O14727 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 AL158070.2-201ENST00000623713 1621 ntBASIC20.27■□□□□ 0.84
APAF1O14727 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
APAF1O14727 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
APAF1O14727 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
APAF1O14727 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.27■□□□□ 0.84
APAF1O14727 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 CLUHP6-201ENST00000580789 941 ntBASIC20.27■□□□□ 0.84
APAF1O14727 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
APAF1O14727 NID2-208ENST00000617139 3827 ntTSL 5 BASIC20.27■□□□□ 0.84
APAF1O14727 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
APAF1O14727 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APAF1O14727 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
APAF1O14727 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
APAF1O14727 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
APAF1O14727 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
APAF1O14727 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.83
APAF1O14727 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
APAF1O14727 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
APAF1O14727 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
APAF1O14727 REXO1L5P-201ENST00000622260 2098 ntBASIC20.26■□□□□ 0.83
APAF1O14727 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
APAF1O14727 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC20.26■□□□□ 0.83
APAF1O14727 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 AC012508.2-201ENST00000567613 1472 ntBASIC20.26■□□□□ 0.83
APAF1O14727 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
APAF1O14727 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.26■□□□□ 0.83
APAF1O14727 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 ZBED1P1-201ENST00000502364 1930 ntBASIC20.26■□□□□ 0.83
APAF1O14727 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APAF1O14727 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
APAF1O14727 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms