Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 C8orf49-201ENST00000525043 1968 ntBASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 CICP13-201ENST00000422015 2789 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 AC018665.1-201ENST00000622927 1362 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 SOCS2P1-201ENST00000417727 557 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 SLC25A47P1-201ENST00000531577 414 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 MIR4313-201ENST00000580760 101 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 AC097359.3-201ENST00000603982 1210 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 AC133552.6-201ENST00000613406 534 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.12□□□□□ -0.15
NPIPA2E9PIF3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 C1QBPP1-201ENST00000400117 770 ntBASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 VDAC1P7-201ENST00000462417 847 ntBASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 AC233724.13-201ENST00000598383 410 ntBASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 MIR6775-201ENST00000617557 69 ntBASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms