Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AL121723.1-201ENST00000445194 1519 ntBASIC12.48□□□□□ -0.41
SRRM4A7MD48 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AC007686.3-201ENST00000619017 3487 ntBASIC12.48□□□□□ -0.41
SRRM4A7MD48 FGD5P1-202ENST00000614866 2498 ntBASIC12.48□□□□□ -0.41
SRRM4A7MD48 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 TREML5P-201ENST00000421694 576 ntBASIC12.48□□□□□ -0.41
SRRM4A7MD48 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AP000845.1-201ENST00000581677 2131 ntBASIC12.48□□□□□ -0.41
SRRM4A7MD48 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 AL844908.2-201ENST00000609461 460 ntBASIC12.48□□□□□ -0.41
SRRM4A7MD48 AL590560.3-201ENST00000623350 461 ntBASIC12.48□□□□□ -0.41
SRRM4A7MD48 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.48□□□□□ -0.41
SRRM4A7MD48 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.47□□□□□ -0.41
SRRM4A7MD48 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SRRM4A7MD48 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 GHSR-202ENST00000427970 912 ntBASIC12.47□□□□□ -0.41
SRRM4A7MD48 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.47□□□□□ -0.41
SRRM4A7MD48 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms