Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMX3A6NHT5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMX3A6NHT5 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.5□□□□□ -0.25
HMX3A6NHT5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
HMX3A6NHT5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HMX3A6NHT5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 AKR1C7P-201ENST00000305623 895 ntBASIC13.49□□□□□ -0.25
HMX3A6NHT5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 MTDHP4-201ENST00000600287 670 ntBASIC13.49□□□□□ -0.25
HMX3A6NHT5 REXO1L6P-202ENST00000619970 1078 ntBASIC13.49□□□□□ -0.25
HMX3A6NHT5 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMX3A6NHT5 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.49□□□□□ -0.25
HMX3A6NHT5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 WASH3P-207ENST00000560956 1394 ntBASIC13.48□□□□□ -0.25
HMX3A6NHT5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 FO538757.1-201ENST00000623083 1397 ntBASIC13.48□□□□□ -0.25
HMX3A6NHT5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.48□□□□□ -0.25
HMX3A6NHT5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 AL139424.1-201ENST00000607572 797 ntBASIC13.48□□□□□ -0.25
HMX3A6NHT5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 ACE3P-201ENST00000423435 1973 ntBASIC13.48□□□□□ -0.25
HMX3A6NHT5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
HMX3A6NHT5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMX3A6NHT5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms