Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TBC1D3FA6NER0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 CICP13-201ENST00000422015 2789 ntBASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 PFN1P12-201ENST00000455938 534 ntBASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 RN7SL560P-201ENST00000577943 264 ntBASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 AC009542.2-202ENST00000619004 1067 ntBASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 LRRC59-203ENST00000576448 1531 ntBASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.36■□□□□ 0.05
TBC1D3FA6NER0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 AL138709.1-201ENST00000614840 1693 ntBASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 AC006001.1-201ENST00000325130 474 ntBASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 ACTBP8-201ENST00000403258 1108 ntBASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 RNA5SP486-201ENST00000515961 83 ntBASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 MIR6869-201ENST00000619434 62 ntBASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 AHCYP2-201ENST00000430630 1300 ntBASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.35■□□□□ 0.05
TBC1D3FA6NER0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms