Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AC134915.1-201ENST00000426461 574 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AC093813.1-201ENST00000605066 256 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AC107373.2-201ENST00000607735 490 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 INTS4P2-202ENST00000614726 2019 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 WASH3P-207ENST00000560956 1394 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC004066.1-201ENST00000502488 802 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 SAMD11P1-201ENST00000571429 661 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC008494.3-201ENST00000606615 944 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC007431.3-201ENST00000623221 587 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 TCAF2P1-201ENST00000291129 2421 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AGAP7P-201ENST00000582299 2062 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AGAP14-201ENST00000624701 2060 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AC012508.2-201ENST00000567613 1472 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 AL138799.1-201ENST00000448213 1675 ntBASIC14.68□□□□□ -0.06
LRIT2A6NDA9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRIT2A6NDA9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRIT2A6NDA9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms