Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SBNO1A3KN83 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
SBNO1A3KN83 AC138696.2-201ENST00000607376 223 ntBASIC20.58■□□□□ 0.88
SBNO1A3KN83 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC20.58■□□□□ 0.88
SBNO1A3KN83 NAP1L6-202ENST00000641404 1222 ntBASIC20.58■□□□□ 0.88
SBNO1A3KN83 AL805961.1-201ENST00000642026 753 ntBASIC20.58■□□□□ 0.88
SBNO1A3KN83 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.58■□□□□ 0.88
SBNO1A3KN83 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SBNO1A3KN83 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SBNO1A3KN83 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SBNO1A3KN83 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.58■□□□□ 0.88
SBNO1A3KN83 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 E2F3P2-201ENST00000447755 1422 ntBASIC20.57■□□□□ 0.88
SBNO1A3KN83 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SBNO1A3KN83 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 AC051619.9-201ENST00000623237 597 ntBASIC20.57■□□□□ 0.88
SBNO1A3KN83 AC079328.2-201ENST00000561241 3354 ntBASIC20.57■□□□□ 0.88
SBNO1A3KN83 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SBNO1A3KN83 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SBNO1A3KN83 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SBNO1A3KN83 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SBNO1A3KN83 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SBNO1A3KN83 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 AC135983.4-201ENST00000564116 1262 ntBASIC20.56■□□□□ 0.88
SBNO1A3KN83 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 AC132192.2-201ENST00000596206 1147 ntBASIC20.56■□□□□ 0.88
SBNO1A3KN83 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SBNO1A3KN83 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 AC010491.1-201ENST00000563101 2797 ntBASIC20.56■□□□□ 0.88
SBNO1A3KN83 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SBNO1A3KN83 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SBNO1A3KN83 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SBNO1A3KN83 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 AC087045.2-201ENST00000606279 1003 ntBASIC20.55■□□□□ 0.88
SBNO1A3KN83 WT1-AS_6.1-201ENST00000614919 121 ntBASIC20.55■□□□□ 0.88
SBNO1A3KN83 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SBNO1A3KN83 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SBNO1A3KN83 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms