Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 CICP4-201ENST00000447359 2812 ntBASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 AC104794.3-201ENST00000566840 1248 ntBASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 AC027796.2-201ENST00000575326 344 ntBASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 AL158212.4-201ENST00000624062 1286 ntBASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 AC126755.1-201ENST00000525846 6405 ntBASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CCDC162PA2VCL2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 AGAP7P-201ENST00000582299 2062 ntBASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 AGAP14-201ENST00000624701 2060 ntBASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 AL137784.3-201ENST00000623858 2288 ntBASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 AC000095.1-201ENST00000603208 874 ntBASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 AL391069.4-201ENST00000609583 481 ntBASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC162PA2VCL2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 AC007326.2-201ENST00000624224 7579 ntBASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC162PA2VCL2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms