Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 EIF3FP3-201ENST00000434851 1086 ntBASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 HSPB1P2-201ENST00000448722 546 ntBASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 ACTG1P17-201ENST00000558391 1119 ntBASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB7Q9Y5E2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 AC005077.2-201ENST00000449786 690 ntBASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 BX284668.4-201ENST00000453917 508 ntBASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 AC126915.1-201ENST00000522847 1038 ntBASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 RN7SL713P-201ENST00000582127 302 ntBASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 PPY2P-201ENST00000582808 702 ntBASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 OR10B1P-201ENST00000601666 907 ntBASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB7Q9Y5E2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 AC004945.1-201ENST00000416738 983 ntBASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 AL021578.1-201ENST00000613646 709 ntBASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 AL603764.1-201ENST00000636452 321 ntBASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHB7Q9Y5E2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB7Q9Y5E2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
PCDHB7Q9Y5E2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PCDHB7Q9Y5E2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms