Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
HPS5Q9UPZ3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.38■□□□□ 0.53
HPS5Q9UPZ3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 AC091046.1-201ENST00000331871 207 ntBASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 AC016694.1-201ENST00000434179 700 ntBASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 RN7SL769P-201ENST00000469386 295 ntBASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 SLED1-202ENST00000512051 380 ntBASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 RHOXF1P1-202ENST00000635473 501 ntBASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPS5Q9UPZ3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 STK33P1-201ENST00000423835 1218 ntBASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 AL359711.2-201ENST00000563105 872 ntBASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 AL109954.1-202ENST00000564051 2148 ntBASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 AC036164.1-201ENST00000570544 333 ntBASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 AC244669.2-201ENST00000612320 853 ntBASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 OR6D1P-203ENST00000641209 4860 ntBASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 AC138035.3-201ENST00000622706 2791 ntBASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.36■□□□□ 0.53
HPS5Q9UPZ3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 MIR33B-201ENST00000385104 96 ntBASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS5Q9UPZ3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms