Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 KRT43P-201ENST00000434019 910 ntBASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 AC007274.1-201ENST00000439805 662 ntBASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 AL109954.1-202ENST00000564051 2148 ntBASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMG20BQ9P0W2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 GNRHR2-203ENST00000581100 1187 ntBASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
HMG20BQ9P0W2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.77■□□□□ 0.59
HMG20BQ9P0W2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMG20BQ9P0W2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMG20BQ9P0W2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.77■□□□□ 0.59
HMG20BQ9P0W2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 BOLA2P3-201ENST00000404566 256 ntBASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 MIR6752-201ENST00000618442 71 ntBASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 AC006486.2-201ENST00000624246 2199 ntBASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMG20BQ9P0W2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 C18orf15-201ENST00000623680 2534 ntBASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms